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Publications

Shillaber, A.S. and Pollyea, R.M. 2013. Using soil CO2 gradients to identify CCS reservoir leakage: Geological Society of America Abstracts with Programs, v. 45, no. 7, p. 99. (poster presentation at national conference).

Van Dusen, E., Pollyea, R.M., and Fischer, M.P. 2013. Understanding the influence of taper angle on fluid system evolution in a critically tapering orogenic wedge: Geological Society of America Abstracts with Programs, v. 45, no. 7, p. 275. (oral presentation at national conference).

N.T. Karonis, K.L. Duffin, C.E. Ordoñez, B. Erdelyi, T.D. Uram, E.C. Olson, G. Coutrakon, M.E. Papka, “Distributed and Hardware Accelerated Computing for Clinical Medical Imaging using Proton Computed Tomography (pCT),” Journal of Parallel and Distributed Computing, December 2013, Volume 73, Issue 12, pp. 1605-1612.

Todd, K.A. (2013, September). “Using X-ray microtomographic imaging to conduct fluid flow simulations on porous media.” Poster session presented at the AAPG-SEG Student Expo, Houston, TX. Won second place for student poster competition.

S. Abeyratne and B. Erdelyi, “Optimization of the Multipole to Local Translation Operator in the Adaptive Fast Multipole Method”, Proceedings of NAPAC2013, Pasadena, September 29-October 04, 2013.

A. Gee and B. Erdelyi, “Study and Comparison of the Method of Moments and the Single Level Fast Multipole Method for 2D Space Charge Tracking”, Proceedings of NAPAC2013, Pasadena, September 29-October 04, 2013.

A. al-Marzouk and B. Erdelyi, “Numerical Integrator for Coulomb Collisions”, Proceedings of NAPAC2013, Pasadena, September 29-October 04, 2013.

H. Schaumburg, B. Erdelyi, “A Picard Iteration-Based Integrator”, Proceedings of NAPAC2013, Pasadena, September 29-October 04, 2013.

S. Abeyratne and B. Erdelyi, "A Novel Differential Algebraic Adaptive Fast Multipole Method", in Proc. 4th IPAC'13, Shanghai, 2013.

S. Abeyratne, B. Erdelyi, S.L. Manikonda, Optimal Fast Multipole Method Data Structures, Conf.Proc. C1205201 (2012) 352-354.

J. Zhou, *A. Brunson, J. Winans, K. Duffin, and N. Karonis, “High Performance Model Selection for Learning-based Biological Image Analysis on a Cluster,'' ACM Conference on Bioinformatics, Computational Biology and Biomedicine (ACM BCB 2013), Washington D.C., September 2013, pp. 324-332.

Yin, Y, “Diversity and evolution of cellulosome modules in metagenomes,” conference talk, the 3rd International Conference on Proteomics & Bioinformatics (Proteomics-2013), DoubleTree by Hilton Philadelphia Center City, USA, July 15-17, 2013.

F. Lemery, P. Mullowney, P. Stolz, K. Duffin, N. Karonis, D. Mihalcea, P. Piot, and J. Winans, “Performances of Vorpal-GPU Slab-symmetric DLW,” The 4th International Particle Accelerator Conference (IPAC13), May 12-17, 2013, Shanghai, China, pp. 1298-1300.

P. Piot, *F. Lemery, D. Mihalcea, C. Prokop, D. Stoltz, Y.-E Sun, “Toward a Dielectric-Wakefield Energy Doubler at the Fermilab’s Advanced Superconducting Test Accelerator,” Proceedings of the 2013 International Accelerator Conference (IPAC13), Shanghai, May 12-17, 2013, p. 1295-1297 (2013).

F. Lemery, H. Panuganti, D. Mihalcea, P. Piot, P. Stoltz, “THz Bench Tests of Slab-symmetric Dielectric Waveguide,” Proceedings of the 2013 International Accelerator Conference (IPAC13), Shanghai, May 12-17, 2013, p. 1292-1294 (2013).

McGinn N, “PlantCAZyme: a database for plant carbohydrate active enzymes,” student poster presentation, BIOS annual Phi Sigma Research Symposium and NIU Undergrad. Research & Artistry Day, April 2013.

C. DeCaro, *V.N. Karunaratne, S. Bera, L.B. Lurio, A.R. Sandy, S. Narayanan, M. Sutton, J. Winans, K. Duffin, *J. Lehuta, and N. Karonis, “X-ray Speckle Visibility Spectroscopy in the Single photon Limit,” Journal of Synchrotron Radiation, March 2013, 20 (2), pp. 332-338, DOI: 10.1107/S0909049512051825.

N. Karonis, G. Coutrakon, K. Duffin, B. Erdelyi, *K. Naglich, S. Penfold, P. Rubinov, V. Rykalin, and V. Zutshi, US Patent Application, “High Performance Computing for Three Dimensional Proton Computed Tomography (HPC-pCT),” Assignees Board of Northern Illinois University, University of Wollongong, and Fermi Research Alliance, US 2013/0015352 A1, January 17, 2013.

B. Erdelyi, The fast multipole method for N-body problems, AIP Conf. Proc. 1507, 387-392 (2012), DOI:10.1063/1.4773727.

Todd, K.A., Watson, H.C., Yu, T., Wang, Y. (2012, December). “The effects of    shear deformation on planetesimal core segregation: Results from in-situ X-ray microtomography”. Poster session presented at the American Geophysical Union Fall Meeting, San Francisco, CA.

K. Duffin, N.T. Karonis, C.E. Ordoñez, M.E. Papka, G. Coutrakon, B. Erdelyi, E.C. Olson, and T.D. Uram, “An Analysis of a Distributed GPU Implementation of Proton Computed Tomographic (pCT) Reconstruction,” The 7th Workshop on Ultrascale Visualization, November 12, 2012, Salt Lake City, UT.

B. Erdelyi, Presentation, “N-body building: the Fast Multipole Method and Differential Algebraic Integrators,” NIU Mathematics Department, October 26,12 (seminar).

Todd, K.A., Watson, H.C., Yu, T., Wang, Y. (2012, June). “The effects of shear deformation on planetesimal core segregation: Results from in-situ X-ray microtomography”. Poster session presented at the V.M. Goldschmidt Annual Conference, Montréal, QC.

B. Erdelyi, Presentation, The fast multipole method for N-body problems, AAC’12, Austin, TX, June 2012 (workshop by invitation only; contributed talk).

G. Coutrakon, K. Duffin, N. Karonis, E. Olson, C. Ordoñez, M.E. Papka, and T. Uram, “High-Performance Multiple-CPU/GPU Proton Computed Tomography,” Trans. ANS, 106, pp. 70-72, June 2012.